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Gel mobility shift scanning of pectin-inducible promoter from Penicillium griseoroseum reveals the involvement of a CCAAT element in the expression of a polygalacturonase gene

机译:灰霉病菌果胶诱导型启动子的凝胶迁移率移动扫描显示,CCAAT元件参与了聚半乳糖醛酸酶基因的表达

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摘要

Previous reports have described pgg2, a polygalacturonase-encoding gene of Penicillium griseoroseum, as an attractive model for transcriptional regulation studies, due to its high expression throughout several in vitro growth conditions, even in the presence of non-inducing sugars such as sucrose. A search for regulatory motifs in the 5' upstream regulatory sequence of pgg2 identified a putative CCAAT box that could justify this expression profile. This element, located 270 bp upstream of the translational start codon, was tested as binding target for regulatory proteins. Analysis of a 170 bp promoter fragment by electrophoretic mobility shift assay (EMSA) with nuclear extracts prepared from mycelia grown in pectin-containing culture medium revealed a high mobility complex that was subsequently confirmed by analyzing it with a double-stranded oligonucleotide spanning the CCAAT motif. A substitution in the core sequence for GTAGG partially abolished the formation of specific complexes, showing the involvement of the CCAAT box in the regulation of the polygalacturonase gene studied.
机译:先前的报道已将pgg2(一种编码青霉半乳糖的多半乳糖醛酸酶的基因)描述为转录调控研究的诱人模型,因为pgg2在整个体外生长条件下均高表达,即使在存在非诱导性糖(例如蔗糖)的情况下也是如此。在pgg2的5'上游调控序列中寻找调控基序,发现了一个推定的CCAAT框可以证明该表达谱是正确的。该元件位于翻译起始密码子上游270 bp处,已被测试为调节蛋白的结合靶标。通过电泳迁移率变动分析(EMSA)对从含果胶的培养基中生长的菌丝体制备的核提取物进行的170 bp启动子片段分析,显示了高迁移率复合物,随后通过跨CCAAT主题的双链寡核苷酸对其进行分析来确认其高迁移率。核心序列中GTAGG的取代部分消除了特定复合物的形成,表明CCAAT框参与了所研究的聚半乳糖醛酸酶基因的调控。

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